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INDONESIA
Journal of Tropical Life Science : International Journal of Theoretical, Experimental, and Applied Life Sciences
Published by Universitas Brawijaya
ISSN : 20875517     EISSN : 25274376     DOI : -
Core Subject : Agriculture, Social,
Agriculture, Biological Sciences & Forestry Environmental Science
The Journal of Tropical Life Science (JTLS) provides publication of full-length papers, short communication and review articles describing of new finding or theory in living system, cells and molecular level in tropical life science and related areas. The journal publishes articles that report novel findings of wide Tropical Life system phenomenon in the areas of biodiversity, agriculture, fisheries, health, husbandry, forestry and environmental technology. JTLS has 1 volume with 3 issues per year.
Arjuna Subject : -
Articles 15 Documents
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Search results for , issue "Vol. 7 No. 3 (2017)" : 15 Documents clear
Molecular Marker-Assisted Selection of Rice Grain Quality on Rice (Oryza sativa L.) Lines Tolerant to Fe Toxicity Stress Silvia Utami; Utut Widyastuti; Dwinita Wikan Utami; Ida Rosdianti; Puji Lestari
Journal of Tropical Life Science Vol. 7 No. 3 (2017)
Publisher : Journal of Tropical Life Science

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.11594/jtls.07.03.13

Abstract

The elite rice has been produced, including iron (Fe) tolerant varieties. To get the appropriate rice lines which superior not only Fe tolerant but also have good grain quality needs to be developed selection system, especially in the use of molecular markers. This study was aimed to develop molecular markers for selection the rice grain quality characters of selected rice lines Fe tolerant. A total of 30 selected Fe tolerant rice lines and 5 parents as control lines were used in this research. Characterization of grain quality were quantitatively using the standard. While for genotyping analysis used 19 molecular markers of STS, SSR, Indel and SNP. This study showed that 14 of 19 markers result polymorphic DNA band (DNA markers). Association analysis of genotype and phenotype showed that 10 of 14 markers were significantly (p < 0.05) related to high quality of rice grain. Among four types of markers used in this study, STS was the most widely associated significantly with four characters of rice quality. The phenotyping analysis showed that the physical grain and palatability quality which obtained from the total mean of 30 rice lines tested tend to nearly with the parent’s value as controls lines. The most of these lines were included in the group IV of National Rice Grain Quality Standard (SNI). The amylose content (AC) showed that the texture was varied from firm and dry (high AC) to soft and sticky (low AC). The association results showed that there were significant (p ≤ 0.05) markers related with the biosynthesis starch genes, i.e: SBE1, SS1, SSIIa, GPA, PUL and S3cl which contributed on the character of rice palatability. These selected significant markers could be useful for screening of other population with Fe tolerant and/ or other desired morpho-agronomical traits in support of rice breeding program in Indonesia.
Nuclear Abnormalities in Erythrocytes of Frogs from Wetlands and Croplands of Western Ghats Indicate Environmental Contaminations Shreyas Raghunath; Chethankumar Masaruru Veerabhadrappa; Sannanegunda Venkatarama Bhatta Krishnamurthy
Journal of Tropical Life Science Vol. 7 No. 3 (2017)
Publisher : Journal of Tropical Life Science

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.11594/jtls.07.03.04

Abstract

Anuran amphibians are the biological models to assess the influence of environmental contamination. We conducted nuclear abnormality assessment and micronuclei test in erythrocytes of frogs to identify an early influence of environmental contaminations. In Western Ghats of India, farmers use different agrochemicals and obviously, the amphibian habitat is contaminated with combinations of many residues. Many frog species use these agro-ecosystem for breeding and to complete early life stage. In the present study, we used Indian skipper frog (Euphlyctis cyanophlyctis (Anura: Ranidae)), a common inhabitant of water bodies in agro-ecosystems of Western Ghats for the assay. We collected the adult frogs from three different habitats; a) the rice paddy fields contaminated with agro-chemicals, b) uncontaminated marsh and c) a shallow water pool. We recorded micronucleus, blebbed, lobed, kidney bean shaped nucleus and nucleus with notches in erythro-cytes of these frogs. These nuclear abnormalities in erythrocytes are quantified.  The incidences of occurrence of micronucleus ranged from 0 to 8 in 1000 analyzed cells.  More than 80% of the frogs living in agro-chemical contaminated site showed these abnormalities. The appearance of nuclear abnormalities indicates that the frogs are affected by agro-chemicals.
Correlation of Interleukin-10, Superoxide Dismutase (SOD), and Malondialdehyde (MDA) Levels with HbA1c in Pediatric Type 1 Diabetes Mellitus Lina Astari; Haryudi Cahyono; Edi Widjajanto
Journal of Tropical Life Science Vol. 7 No. 3 (2017)
Publisher : Journal of Tropical Life Science

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.11594/jtls.07.03.15

Abstract

Type 1 diabetes mellitus (T1DM) is an autoimmune disease characterized by pancreatic β-cell destruction and considered to be correlated with oxidative stress. This study aimed to investigate the association of oxidative stress [superoxide dismutase (SOD) and malondialdehyde (MDA) levels], inflammation [interleukin 10 (IL-10)], and glycemic control (HbA1c) in pediatric T1DM patients. This study included 25 T1DM subjects and 25 healthy control subjects and was designed as a cross- sectional study. SOD, MDA, and IL-10 levels were measured by ELISA. We obtained that that IL-10 and SOD levels were significantly decreased in the T1DM group, but MDA and HbA1c levels were significantly elevated in the T1DM group. IL-10 levels were positively correlated with SOD levels and negatively correlated with MDA and HbA1c. SOD levels were negatively correlated with HbA1c levels. MDA was positively correlated with HbA1c levels. IL-10 and SOD levels were significantly decreased, but MDA and HbA1c levels were significantly elevated in the T1DM group.
Differences in the Levels of Interleukin-1β (IL-1β) and Interleukin-1 Receptor Antagonist (IL-1ra) in Children with Status Epilepticus and Febrile Seizure Fita Shofiyah; Masdar Muid; Hidayat Sujuti
Journal of Tropical Life Science Vol. 7 No. 3 (2017)
Publisher : Journal of Tropical Life Science

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.11594/jtls.07.03.05

Abstract

Proinflammatory cytokines are elevated in status epilepticus and febrile seizure and associated with tissue damage. This study aimed to investigate the differences in interleukin 1 beta (IL-1β) and interleukin 1 receptor agonist (IL-1ra) levels in status epilepticus as compared with febrile seizure and febrile. This cross-sectional study was designed to include 45 subjects divided equally into three groups (status epilepticus, febrile seizure, and febrile). Both IL-1β and IL-1ra were measured by using an ELISA method. Results showed that IL-1β levels were significantly higher in the status epilepticus group as compared with the febrile seizure and febrile groups (p < 0.05). IL-1ra levels in the status epilepticus group were significantly lower compared with the febrile seizure group (p = 0.04). Consistently, the IL-1β/IL-1ra ratio in the status epilepticus group was significantly higher as compared with the febrile seizure group (p = 0.01). We concluded that IL-1β and the IL-1β/IL-1ra ratio were significantly higher in status epilepticus. IL-1ra levels were significantly higher in the febrile seizure group.
Pectinase Production by Bacillus and Paenibacillus sp. Isolated from Decomposing Wood Residues in the Lagos Lagoon Busayo Tosin Akinyemi; Olanike Maria Buraimoh; Olayemi Omowunmi Ogunrinde; Olukayode Oladipo Amund
Journal of Tropical Life Science Vol. 7 No. 3 (2017)
Publisher : Journal of Tropical Life Science

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.11594/jtls.07.03.03

Abstract

Three wood decomposing bacteria isolated from the Lagos lagoon, Bacillus megaterium, Bacillus bataviensis and Paenibacillus sp. were screened for their pectinase producing abilities using pectin as substrate under submerged fermentation (SMF) conditions. The results showed that all three isolates produced appreciable pectinolytic activities. Paenibacillus sp. showed the highest pectinase activity when compared with the other two isolates. The optimum pH for pectinase activity for both B. megaterium and B. bataviensis was 8.0 while it was 6.5 for Paenibacillus sp., B. bataviensis, and B. megaterium showed optimum pectinase activity at 60°C and Paenibacillus sp. at 40°C. Metal ions such as Na+ and K+ improved the activity of pectinase produced by the three isolates when compared to the effect of Zn2+ and Mn2+. The molecular weights of the enzymes were also estimated by gel filtration as 29,512 da, 32,359 da, and 25,119 da for Paenibacillus sp., B. megaterium and B. bataviensis respectively. The study has provided a platform for further investigation into the biochemical characterization of the enzyme, and optimization of culture conditions to scale up pectinase production for commercial exploitation.
Soil Seed Bank of Two Karst Ecosystems in Bogor, Indonesia: Similarity with the Aboveground Vegeta-tion and Its Restoration Potential Winda Utami Putri; Ibnul Qayim; Abdul Qadir
Journal of Tropical Life Science Vol. 7 No. 3 (2017)
Publisher : Journal of Tropical Life Science

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.11594/jtls.07.03.07

Abstract

Karst ecosystem in Bogor is currently threatened by mining activities. Restoration of the disturbed karst areas is urgently required. Seed banks are considered as an important potential seed sources for restoration. This study was conducted to quantify the composition and species diversity of the aboveground vegetation and the seed bank. The study determined the correspondence between the seed bank with the aboveground vegetation in relation with ecosystem restoration. Twenty 6 m × 6 m vegetation plots were established. A total of sixty soil samples were taken from the study sites. The seed bank was studied using germination experiment. All plant species in the vegetation plots and seedlings growing from all soil samples were identified and the number was counted to determine the composition, index of diversity, and index of similarity. There were 80 species from 41 families found in the seed bank in Mt. Nyungcung, dominated by Clidemia hirta (Melastomataceae), whereas 50 species from 29 families found in Mt. Kapur with Cecropia peltata (Urticaceae) dominated the site. Diversity index of Mt. Nyungcung and Mt. Kapur seed banks were 2.09 ± 0.21 and 1.78 ± 0.47 respectively. The similarity index between seed bank and the aboveground vegetation in the two study sites were 32.86% and 27.66% respectively. Mt. Nyungcung seed bank was more diverse than Mt. Kapur. The similarity between the seed bank with the aboveground vegetation in the two study sites were low. Further assessment is needed to determine the role of the seed bank of Mt. Nyungcung and Mt. Kapur in the restoration of the ecosystems.
Growth Rate Differences of Chrysomya sp. Larvae on Rattus novergicus Wistar Strain Corpse Exposed and Unexposed to Ephedrine Toxic Dose Sri Poeranto; Wening Prastowo; Diandra Laksmita Resmi; Rivo Yudhinata Brian Nugraha
Journal of Tropical Life Science Vol. 7 No. 3 (2017)
Publisher : Journal of Tropical Life Science

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.11594/jtls.07.03.06

Abstract

Post Mortem Interval (PMI) is used as a parameter to define the onset, cause, manner, and time of death to help maintenance of law and identify crime victims by the age of the larvae found. Larval growth is influenced by the temperature, humidity, and contaminant (drug or toxic). This experiment used two media of dead rats (200 grams), one given ephedrine of LD50 = 266 mg/kg and the other without ephedrine. Both were put in 2 cages each containing 50 Chrysomya sp. Ten larvae were randomly taken every day for 14 days to be measured their length, weight, and duration of growth. The 3rd larvae stage in the media with ephedrine had weight gain on 5th – 6th day morning, while larvae in media without ephedrine had static weight gain on 5th day morning - afternoon and weight decrement on 6 – 7th day morning. Larva’s peak ratio of length/weight in the media with ephedrine was higher than that of larvae in the media without ephedrine. Larvae on media with ephedrine grew faster in 1st, 2nd, 3rd larvae stage, and pupal stage compared to larvae without ephedrine. Therefore, this study indicates that ephedrine can accelerate the growth rate of Chrysomya sp. larvae.
The Classification of Bambusa spp. from Celebes Based on the Micromorphological Characters of Leaf Epidermis Alin Liana; Purnomo Purnomo; Issirep Sumardi; Budi Setiadi Daryono
Journal of Tropical Life Science Vol. 7 No. 3 (2017)
Publisher : Journal of Tropical Life Science

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.11594/jtls.07.03.02

Abstract

Species of Bambusa had widespread in Celebes, especially for Bambusa striata and Bambusa vulgaris. As an effect of the lacking of flowering, species identification mainly depends on vegetative features, and leaf epidermal micromorphology has proven to be useful in bamboo taxonomy. The objective of this research was to describe the classification of Bambusa from Celebes based on the micromorphological characters of leaf epidermis. The specimens were collected from wild population. The samples of leaf were collected from five member of Bambusa i.e.: Bambusa blumeana, Bambusa maculata, B. striata, B. vulgaris and Bambusa sp. Micromorphological characters were identified using Scanning Electron Microscopy (SEM). Leaf epidermis characters separated B. blumeana from other species of Bambusa. Furthermore, B. striata were closely related to B. maculata in variation of bulliform cells. As an invention, we release peltate hair as a new type of trichome in Bambusa. The presence of various prickles, trichomes and bulliform cells may be especially useful in delimiting species.
Bioactivity of Citrus hystrix D.C. Leaf Extract Against Cigarette Beetle Lasioderma serricorne (F.) Silvi Ikawati; Moh. Syamsu Dhuha; Toto Himawan
Journal of Tropical Life Science Vol. 7 No. 3 (2017)
Publisher : Journal of Tropical Life Science

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.11594/jtls.07.03.01

Abstract

The major control of pest stored Lasioderma serricorne for using synthetic pesticides, look like phosphine. Although quite effective, synthetic pesticides have a negative effect on the environment, such as pest re-sistance, deadly natural enemies, residues that are harmful to the environment and human health. The use of botanical pesticides as an alternative control be the focus this study. Botanical pesticides are selective to the target, safe for non-target insects and the environment. This research studies the repellent and fumigant activi-ty of the leaf extract of Citrus hystrix against all L. serricorne life stage. The results of GC-MS analysis of leaf crude extracts of C. hystrix with N-hexane solvent showed the highest percentage in the citronellal compound (86.43%). C. hystrix leaf extract showed stronger fumigant against pupae and eggs, compared adults, and larvae. The toxicity of the leaf extract of C. hystrix increased with increasing concentration. At a concentration of 60 ppm, fumigant activity showed the toxicity of 98.75% (pupae), 93.75% (eggs), 86.25% (adults) and 76.25% (larvae). Sequentially the LC50 value of fumigant activity from the highest to the lowest as follows; larvae 47.56 ppm, adults 43.42 ppm, eggs 31.61 and pupae 29.63 ppm. Extract of leaves of C. hystrix, have character repellent against L. serricorne. At a concentration of 60 ppm the IR value of 66% including repellent class IV, which means strong repellent level. Based on the results of the research, extracts of leaves of C. hystrix has a fumigant activity and repellent for controlling L. serricorne.
Selection of High Oil Yielding Trees of Millettia pinnata (L.) Panigrahi, Vegetative Propagation and Growth in the Field Ni Luh Arpiwi; I Made Sutha Negara; I Nengah Simpen
Journal of Tropical Life Science Vol. 7 No. 3 (2017)
Publisher : Journal of Tropical Life Science

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.11594/jtls.07.03.11

Abstract

Millettia pinnata (L.) Panigrahi is a potential legume tree that produces seed oil for biodiesel feedstock. The initial step for raising a large-scale plantation of the species is selection of high oil yielding trees from the natural habitat. This is followed by vegetative propagation of the selected trees and then testing the growth of the clone in the field.  The aim of the present study was to select high-oil yielding trees of M. pinnata, to propagate the selected trees by budding and to evaluate the survival and growth of budded plants in the field. Pods were collected from 30 trees in Lovina Beach, Buleleng Regency, Bali. Oil was extracted from seeds using soxhlet with hexane as a solvent.  The high oil yielding trees were propagated by budding using root stocks grown from M. pinnata seeds.  Scions were taken from young branches of selected trees. Incision was made on rootstock and the same size of cut was made on a scion containing a single bud.  The scion was inserted to the incision of rootstock then closed tightly using plastic strips.   The plastic was removed when the scion grew into a little green shoot. One month after plastic removal, the scion union grew into a single shoot and then the budded plants were removed to polybags. Budded plants were planted in the field of Bukit Jimbaran, Badung Regency, Bali with 4 × 4 spacing. Results showed all budded plants successfully grow new shoots. Two months after planting the survival of budded plants was 100%. Plant height increased by 22.13 cm, stem diameter increased by 2.43 mm and the number of compound leaf increased by 2.08.  It can be concluded that four high oil yielding trees were selected from Lovina Beach and successfully propagated by budding. Survival of budded plants was 100% with vigorous growth.

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